MTRF1L

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MTRF1L mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MTRF1L-associated genes across cancer lineages are MS4A4A, OR52H1, and TAFA1. Each is linked with MTRF1L in more than 1 cancer types. Because this analysis shows association rather than direction, both MTRF1L-to-partner and partner-to-MTRF1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MS4A4A grouped by MTRF1L-low versus MTRF1L-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MTRF1L→partner) and Y-score (partner→MTRF1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEMS4A4A →+0.186+3.678<.001.00931
LARGE_INTESTINEOR52H1 →+0.027+4.347<.001.00131
LARGE_INTESTINETAFA1 →+0.329+4.688<.001<.00131
BLOOD_LeukemiaOR51T1 →+0.071+4.922<.001.00931
BLOOD_LeukemiaFABP12 →+0.085+5.201<.001.00631
BLOOD_LeukemiaGSG1L2 →+0.058+5.969<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

MS4A4A by MTRF1L expression — LARGE_INTESTINE

Box plot of MS4A4A in MTRF1L-low vs MTRF1L-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration