MSX1

Across TCGA patient cohorts, MSX1 mutation is significantly associated with the total protein of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MSX1-associated genes across cancer lineages are RBM15. Each is linked with MSX1 in more than 1 cancer types. Because this analysis shows association rather than direction, both MSX1-to-partner and partner-to-MSX1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RBM15 grouped by MSX1-low versus MSX1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MSX1→partner) and Y-score (partner→MSX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RBM15 →	+0.390	+2.820	.045	.036	1	2

Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

RBM15 by MSX1 expression — UCEC

Explore this box plot interactively →