MSL3

Across TCGA patient cohorts, MSL3 protein abundance is significantly associated with the RNA expression of many other genes, with 10,329 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MSL3-associated genes across cancer lineages are PATZ1, STMN1, and TAF5. Each is linked with MSL3 in more than 3 cancer types. Because this analysis shows association rather than direction, both MSL3-to-partner and partner-to-MSL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MSL3 versus PATZ1 in HNSC, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MSL3→partner) and Y-score (partner→MSL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PATZ1 →	+0.820	+0.408	.006	.006	3	4
BRCA	STMN1 →	+1.134	+0.308	<.001	<.001	3	4
OV	TAF5 →	+0.535	+0.678	<.001	<.001	3	4
BRCA	CDCA4 →	+0.758	+0.234	<.001	.004	3	4
OV	SMARCC1 →	+0.503	+0.692	.002	<.001	3	4
OV	PTBP2 →	+0.672	+0.644	.004	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,329 associations by consensus.

MSL3 vs PATZ1 — HNSC

Explore this scatter interactively →