MSGN1

Across TCGA cell cohorts, MSGN1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,178 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible MSGN1-associated GO terms across cancer lineages are rRNA metabolic process, Ribosome biogenesis, and Maturation of LSU-rRNA. Each is linked with MSGN1 in more than 2 cancer types. Because this analysis shows association rather than direction, both MSGN1-to-partner and partner-to-MSGN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA metabolic process grouped by MSGN1-low versus MSGN1-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MSGN1→partner) and Y-score (partner→MSGN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	rRNA metabolic process →	+0.079	+0.089	<.001	.001	3	3
SOFT_TISSUE	Ribosome biogenesis →	+0.068	+0.089	<.001	.001	3	3
SOFT_TISSUE	Maturation of LSU-rRNA →	+0.082	+0.077	.003	.007	3	3
SOFT_TISSUE	rRNA processing →	+0.077	+0.089	<.001	.001	3	3
BLOOD_Lymphoma	Response to food →	-0.099	-0.072	.001	.003	3	2
BLOOD_Lymphoma	Spliceosomal snRNP assembly →	+0.071	+0.068	<.001	.008	2	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,178 associations by consensus.

rRNA metabolic process by MSGN1 expression — SOFT_TISSUE

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