MSANTD2

Across TCGA cell cohorts, MSANTD2 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible MSANTD2-associated genes across cancer lineages are CT47A6, ZSWIM2, and GPR33. Each is linked with MSANTD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both MSANTD2-to-partner and partner-to-MSANTD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CT47A6 grouped by MSANTD2-low versus MSANTD2-high in STOMACH.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MSANTD2→partner) and Y-score (partner→MSANTD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	CT47A6 →	+0.046	+5.285	<.001	.003	3	1
LARGE_INTESTINE	ZSWIM2 →	+0.021	+4.022	<.001	.006	3	1
LARGE_INTESTINE	GPR33 →	+0.158	+3.882	<.001	.001	3	1
LUNG_NSCLC_LUAD	MRGPRG →	+0.029	+4.544	<.001	.003	3	1
LUNG_NSCLC_LUAD	OR4C12 →	+0.025	+6.247	<.001	<.001	3	1
OVARY	XAGE5 →	+0.255	+5.196	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

CT47A6 by MSANTD2 expression — STOMACH

Explore this box plot interactively →