MRNIP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MRNIP protein abundance is significantly associated with the RNA expression of many other genes, with 12,543 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MRNIP-associated genes across cancer lineages are CLK4, CEP120, and RUFY1. Each is linked with MRNIP in more than 4 cancer types. Because this analysis shows association rather than direction, both MRNIP-to-partner and partner-to-MRNIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MRNIP versus CLK4 in OV, with a Pearson correlation of 0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MRNIP→partner) and Y-score (partner→MRNIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCLK4 →+0.985+0.611.001<.00135
BRCACEP120 →+0.388+0.290<.001<.00135
BRCARUFY1 →+0.574+0.412<.001<.00135
OVBRD8 →+0.962+0.502.001.00234
UCECIK →+0.817+0.348<.001<.00134
BRCACREBRF →+0.459+0.306<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,543 associations by consensus.

MRNIP vs CLK4 — OV

Per-sample scatter of MRNIP vs CLK4 in OV (Pearson r = 0.54).

Explore this scatter interactively →

Exploration