MMP28

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MMP28 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,306 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible MMP28-associated GO terms across cancer lineages are Pressure natriuresis, Positive regulation of protein localization to cell periphery, and Meiotic sister chromatid cohesion. Each is linked with MMP28 in more than 8 cancer types. Because this analysis shows association rather than direction, both MMP28-to-partner and partner-to-MMP28 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pressure natriuresis grouped by MMP28-low versus MMP28-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MMP28→partner) and Y-score (partner→MMP28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHPressure natriuresis →+1.188+2.151<.001<.00139
STOMACHPositive regulation of protein localization to cell periphery →+0.140+2.305<.001.00139
STOMACHMeiotic sister chromatid cohesion →-0.096-1.899.009.00338
PANCREASHomophilic cell-cell adhesion →+0.142+2.197<.001.00638
STOMACHRegulation of striated muscle contraction →+0.114+1.871<.001<.00138
PANCREASLeukotriene B4 catabolic process →+1.569+4.227<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,306 associations by consensus.

Pressure natriuresis by MMP28 expression — STOMACH

Box plot of Pressure natriuresis in MMP28-low vs MMP28-high samples in STOMACH.

Explore this box plot interactively →

Exploration