MMP13

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MMP13 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible MMP13-associated genes across cancer lineages are OR6T1, R3HDML, and OR2B3. Each is linked with MMP13 in more than 1 cancer types. Because this analysis shows association rather than direction, both MMP13-to-partner and partner-to-MMP13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR6T1 grouped by MMP13-low versus MMP13-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MMP13→partner) and Y-score (partner→MMP13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaOR6T1 →+0.052+3.906<.001.00931
BLOOD_LymphomaR3HDML →+0.006+5.209<.001.00531
CNSOR2B3 →+0.029+4.321<.001.00931
BLOOD_LeukemiaCCKAR →+0.038+4.409<.001.00531
BLOOD_LeukemiaCYP4A11 →+0.021+4.705.008.00331
BLOOD_LeukemiaTLE7 →+0.032+4.969<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

OR6T1 by MMP13 expression — BLOOD_Myeloma

Box plot of OR6T1 in MMP13-low vs MMP13-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration