MKX

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MKX mutation is significantly associated with the total protein of many other genes, with 40 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MKX-associated genes across cancer lineages are Ku80, JNK_pT183_Y185, and PDCD4. Each is linked with MKX in more than 2 cancer types. Because this analysis shows association rather than direction, both MKX-to-partner and partner-to-MKX results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by MKX-low versus MKX-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MKX→partner) and Y-score (partner→MKX) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMKu80 →+0.310+3.169.009.01733
UCECJNK_pT183_Y185 →-0.163-2.321.006.00532
UCECPDCD4 →-0.509-2.000.002.02932
UCECSmad3 →+0.128+2.115.016.01732
UCECCaspase-8 →-0.249-3.780.005<.00132
UCECcIAP →+0.095+2.594.049.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 40 associations by consensus.

Ku80 by MKX expression — SKCM

Box plot of Ku80 in MKX-low vs MKX-high samples in SKCM.

Explore this box plot interactively →

Exploration