MIS18BP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIS18BP1 protein abundance is significantly associated with the RNA expression of many other genes, with 7,617 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MIS18BP1-associated genes across cancer lineages are VRK1, EZH2, and FOXM1. Each is linked with MIS18BP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both MIS18BP1-to-partner and partner-to-MIS18BP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIS18BP1 versus VRK1 in LSCC, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIS18BP1→partner) and Y-score (partner→MIS18BP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCVRK1 →+0.775+0.495<.001<.00134
LSCCEZH2 →+1.108+0.717<.001<.00134
BRCAFOXM1 →+1.126+0.420.002.00534
UCECECT2 →+1.099+0.556<.001<.00134
BRCASTMN1 →+1.002+0.605<.001<.00134
UCECKIF18A →+0.838+0.451<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,617 associations by consensus.

MIS18BP1 vs VRK1 — LSCC

Per-sample scatter of MIS18BP1 vs VRK1 in LSCC (Pearson r = 0.68).

Explore this scatter interactively →

Exploration