MIR563

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR563 mutation is significantly associated with the RNA expression of many other genes, with 16 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MIR563-associated genes across cancer lineages are NUDT4B, BNIP3P4, and MIR6500. Each is linked with MIR563 in more than 1 cancer types. Because this analysis shows association rather than direction, both MIR563-to-partner and partner-to-MIR563 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR563→partner) and Y-score (partner→MIR563) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNUDT4B →+0.159+5.621<.001.00431
UCECBNIP3P4 →+0.233+5.484<.001.00531
UCECMIR6500 →+0.674+5.133.001.00831
UCECPRAMEF13 →+0.086+6.453<.001.00131
UCECSNORD114-1 →+0.754+5.299.008.00631
UCECRN7SKP113 →+0.268+5.621<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

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