MIR548AG1

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR548AG1 RNA expression is significantly associated with the mutation status of many other genes, with 81 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible MIR548AG1-associated genes across cancer lineages are C20orf96, WDR55, and NPPB. Each is linked with MIR548AG1 in more than 1 cancer types. Because this analysis shows association rather than direction, both MIR548AG1-to-partner and partner-to-MIR548AG1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C20orf96 grouped by MIR548AG1-low versus MIR548AG1-high in BRCA.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR548AG1→partner) and Y-score (partner→MIR548AG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAC20orf96 →+8.055+1.311.007<.00132
HNSCWDR55 →+7.954+0.447.008<.00131
HNSCNPPB →+7.954+0.447.008<.00131
HNSCEGLN1 →+7.954+0.447.008<.00131
HNSCVLDLR →+7.954+0.583.008<.00131
HNSCSLC30A7 →+7.954+0.583.008<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 81 associations by consensus.

C20orf96 by MIR548AG1 expression — BRCA

Box plot of C20orf96 in MIR548AG1-low vs MIR548AG1-high samples in BRCA.

Explore this box plot interactively →

Exploration