MIR4999

Across TCGA patient cohorts, MIR4999 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,295 significant associations in total. STAD shows the largest number of these associations.

The most reproducible MIR4999-associated GO terms across cancer lineages are RNA-templated DNA biosynthetic process, Telomere maintenance via telomere lengthening, and Protein localization to nuclear body. Each is linked with MIR4999 in more than 16 cancer types. Because this analysis shows association rather than direction, both MIR4999-to-partner and partner-to-MIR4999 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA-templated DNA biosynthetic process grouped by MIR4999-low versus MIR4999-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4999→partner) and Y-score (partner→MIR4999) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA-templated DNA biosynthetic process →	+0.045	+0.484	<.001	<.001	3	17
STAD	Telomere maintenance via telomere lengthening →	+0.042	+0.417	<.001	<.001	3	16
ESCA	Protein localization to nuclear body →	+0.060	+0.449	.003	.003	2	17
STAD	Regulation of RNA splicing →	+0.048	+0.467	<.001	<.001	3	16
STAD	tRNA modification →	+0.036	+0.378	<.001	<.001	3	16
ESCA	Translational elongation →	+0.051	+0.516	.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,295 associations by consensus.

RNA-templated DNA biosynthetic process by MIR4999 expression — STAD

Explore this box plot interactively →