MIR4789

Across TCGA patient cohorts, MIR4789 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,899 significant associations in total. STAD shows the largest number of these associations.

The most reproducible MIR4789-associated GO terms across cancer lineages are DNA-templated transcription elongation, Obsolete histone modification, and Regulation of DNA-templated transcription elongation. Each is linked with MIR4789 in more than 8 cancer types. Because this analysis shows association rather than direction, both MIR4789-to-partner and partner-to-MIR4789 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA-templated transcription elongation grouped by MIR4789-low versus MIR4789-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4789→partner) and Y-score (partner→MIR4789) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	DNA-templated transcription elongation →	+0.073	+0.148	<.001	<.001	3	8
STAD	Obsolete histone modification →	+0.062	+0.225	<.001	<.001	3	7
STAD	Regulation of DNA-templated transcription elongation →	+0.073	+0.166	<.001	<.001	3	7
STAD	Epigenetic regulation of gene expression →	+0.069	+0.183	<.001	<.001	3	7
STAD	Phospholipid biosynthetic process →	+0.069	+0.170	<.001	<.001	3	7
UCEC	Glycerophospholipid metabolic process →	+0.072	+0.126	<.001	.004	1	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,899 associations by consensus.

DNA-templated transcription elongation by MIR4789 expression — STAD

Explore this box plot interactively →