MIR4642

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR4642 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,485 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MIR4642-associated proteins across cancer lineages are ZNF318_S81, HDAC2, and STAG2. Each is linked with MIR4642 in more than 2 cancer types. Because this analysis shows association rather than direction, both MIR4642-to-partner and partner-to-MIR4642 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR4642 versus ZNF318_S81 in LSCC, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4642→partner) and Y-score (partner→MIR4642) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCZNF318_S81 →+0.541+0.818<.001<.00133
GBMHDAC2 →+0.324+0.674<.001.00133
GBMSTAG2 →+0.369+0.529.002.00933
GBMPRPF39 →+0.214+0.667<.001.00833
OVDDX52_S22 →+0.896+0.246<.001.00532
GBMU2AF2 →+0.180+0.628.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,485 associations by consensus.

MIR4642 vs ZNF318_S81 — LSCC

Per-sample scatter of MIR4642 vs ZNF318_S81 in LSCC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration