MIR4642

Across TCGA patient cohorts, MIR4642 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,191 significant associations in total. STAD shows the largest number of these associations.

The most reproducible MIR4642-associated GO terms across cancer lineages are Peptidyl-lysine acetylation, Regulation of RNA splicing, and DNA-templated transcription initiation. Each is linked with MIR4642 in more than 19 cancer types. Because this analysis shows association rather than direction, both MIR4642-to-partner and partner-to-MIR4642 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine acetylation grouped by MIR4642-low versus MIR4642-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4642→partner) and Y-score (partner→MIR4642) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Peptidyl-lysine acetylation →	+0.039	+0.449	<.001	<.001	3	20
ESCA	Regulation of RNA splicing →	+0.062	+0.695	.004	<.001	3	19
KIRP	DNA-templated transcription initiation →	+0.036	+0.227	<.001	<.001	3	18
KIRP	Transcription initiation at RNA polymerase II promoter →	+0.038	+0.248	<.001	<.001	3	18
ESCA	Positive regulation of DNA-templated transcription initiation →	+0.039	+0.430	.001	<.001	3	17
ESCA	Microtubule-based transport →	+0.026	+0.417	.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,191 associations by consensus.

Peptidyl-lysine acetylation by MIR4642 expression — ESCA

Explore this box plot interactively →