MIR4299

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR4299 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,638 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible MIR4299-associated proteins across cancer lineages are ACAA2, NKRF, and NOTCH3. Each is linked with MIR4299 in more than 2 cancer types. Because this analysis shows association rather than direction, both MIR4299-to-partner and partner-to-MIR4299 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR4299 versus ACAA2 in HNSC, with a Pearson correlation of -0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4299→partner) and Y-score (partner→MIR4299) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCACAA2 →-0.300-1.113<.001<.00132
LSCCNKRF →+0.247+0.740.007.00332
HNSCNOTCH3 →+0.441+0.749<.001<.00132
HNSCNUCKS1_S144 →+0.529+0.810<.001<.00132
LSCCNUDT1 →+0.300+0.802<.001.00632
LSCCNUP42 →+0.137+1.121.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,638 associations by consensus.

MIR4299 vs ACAA2 — HNSC

Per-sample scatter of MIR4299 vs ACAA2 in HNSC (Pearson r = -0.29).

Explore this scatter interactively →

Exploration