MIR3973

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR3973 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,579 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MIR3973-associated proteins across cancer lineages are SMC6, TRADD, and PAFAH1B3. Each is linked with MIR3973 in more than 2 cancer types. Because this analysis shows association rather than direction, both MIR3973-to-partner and partner-to-MIR3973 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR3973 versus SMC6 in GBM, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR3973→partner) and Y-score (partner→MIR3973) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSMC6 →+0.287+0.956.001<.00133
GBMTRADD →-0.289-0.719<.001<.00133
LSCCPAFAH1B3 →+0.348+0.701.004.00133
GBMZMYM2 →+0.286+0.550<.001.00132
GBMZNF318 →+0.240+0.642<.001<.00132
CCRCCZNF326_S91 →+0.561+0.925<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,579 associations by consensus.

MIR3973 vs SMC6 — GBM

Per-sample scatter of MIR3973 vs SMC6 in GBM (Pearson r = 0.33).

Explore this scatter interactively →

Exploration