MIPEP

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIPEP mutation is significantly associated with the total protein of many other genes, with 50 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MIPEP-associated genes across cancer lineages are C-Raf, MEK1, and Notch1. Each is linked with MIPEP in more than 2 cancer types. Because this analysis shows association rather than direction, both MIPEP-to-partner and partner-to-MIPEP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C-Raf grouped by MIPEP-low versus MIPEP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIPEP→partner) and Y-score (partner→MIPEP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC-Raf →+0.182+2.222<.001.01033
UCECMEK1 →+0.412+2.392.001<.00132
UCECNotch1 →+0.142+1.362.004.03732
UCECSTAT3_pY705 →-0.434-2.492<.001.00132
UCECASNS →+0.407+2.222.001.01032
UCECBax →+0.225+2.222.007.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 50 associations by consensus.

C-Raf by MIPEP expression — UCEC

Box plot of C-Raf in MIPEP-low vs MIPEP-high samples in UCEC.

Explore this box plot interactively →

Exploration