MINDY4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MINDY4 protein abundance is significantly associated with the RNA expression of many other genes, with 8,739 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MINDY4-associated genes across cancer lineages are CCDC113, OSCP1, and ZBBX. Each is linked with MINDY4 in more than 3 cancer types. Because this analysis shows association rather than direction, both MINDY4-to-partner and partner-to-MINDY4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MINDY4 versus CCDC113 in UCEC, with a Pearson correlation of 0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MINDY4→partner) and Y-score (partner→MINDY4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC113 →+0.991+0.491<.001<.00134
UCECOSCP1 →+0.729+0.471<.001<.00134
UCECZBBX →+1.646+0.516<.001<.00134
UCECDNAH12 →+1.679+0.512<.001<.00134
UCECPPIL6 →+1.082+0.600<.001<.00134
UCECMORN2 →+1.049+0.594.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,739 associations by consensus.

MINDY4 vs CCDC113 — UCEC

Per-sample scatter of MINDY4 vs CCDC113 in UCEC (Pearson r = 0.60).

Explore this scatter interactively →

Exploration