MINDY2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MINDY2 protein abundance is significantly associated with the RNA expression of many other genes, with 9,534 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MINDY2-associated genes across cancer lineages are IRAG1, TIMP3, and MEIS3. Each is linked with MINDY2 in more than 6 cancer types. Because this analysis shows association rather than direction, both MINDY2-to-partner and partner-to-MINDY2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MINDY2 versus IRAG1 in OV, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MINDY2→partner) and Y-score (partner→MINDY2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVIRAG1 →+1.147+0.287<.001<.00137
CCRCCTIMP3 →+1.424+0.268<.001<.00136
UCECMEIS3 →+1.123+0.271<.001<.00136
OVAOC3 →+1.157+0.245<.001.00136
OVEDNRA →+1.599+0.476<.001<.00136
BRCACOLEC12 →+1.084+0.404<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,534 associations by consensus.

MINDY2 vs IRAG1 — OV

Per-sample scatter of MINDY2 vs IRAG1 in OV (Pearson r = 0.51).

Explore this scatter interactively →

Exploration