MILR1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MILR1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,100 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MILR1-associated genes across cancer lineages are NCF4, CD33, and PIK3CG. Each is linked with MILR1 in more than 4 cancer types. Because this analysis shows association rather than direction, both MILR1-to-partner and partner-to-MILR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MILR1 versus NCF4 in CCRCC, with a Pearson correlation of 0.71.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MILR1→partner) and Y-score (partner→MILR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCNCF4 →+1.124+0.755.002.00135
CCRCCCD33 →+0.785+0.667<.001<.00135
LSCCPIK3CG →+1.052+0.489<.001<.00135
CCRCCCD4 →+0.979+0.785.003<.00135
LSCCBTK →+0.917+0.479<.001<.00135
LSCCBIN2 →+0.873+0.518<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,100 associations by consensus.

MILR1 vs NCF4 — CCRCC

Per-sample scatter of MILR1 vs NCF4 in CCRCC (Pearson r = 0.71).

Explore this scatter interactively →

Exploration