MICA

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MICA RNA expression is significantly associated with the protein abundance of many other proteins, with 12,787 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MICA-associated proteins across cancer lineages are ILK, LMNA, and PRDX6_T44. Each is linked with MICA in more than 4 cancer types. Because this analysis shows association rather than direction, both MICA-to-partner and partner-to-MICA results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MICA→partner) and Y-score (partner→MICA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMILK →+0.401+0.744<.001<.00135
GBMLMNA →+0.519+0.693<.001.00135
PDACPRDX6_T44 →+0.646+0.380<.001<.00134
UCECNEMF →-0.221-0.605<.001.00234
GBMVCL →+0.332+0.572.003.00825
LUADCHD7_S2956 →-0.647-0.456.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,787 associations by consensus.

Exploration