Across TCGA pan-cancer cohorts, MGAT3 mass-spec protein differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of MGAT3’s most consistent transcriptional readouts.
The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where MGAT3 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types MGAT3 is over-expressed in tumor, although a few such as CCRCC and LUAD show the opposite, repressed pattern.
CCRCC, LUAD, and LSCC are the cancer types where MGAT3 tumor–normal differential expression is most reproducible.