MESD

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MESD protein abundance is significantly associated with the RNA expression of many other genes, with 17,242 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MESD-associated genes across cancer lineages are SRPK2, MAL2, and SMURF1. Each is linked with MESD in more than 3 cancer types. Because this analysis shows association rather than direction, both MESD-to-partner and partner-to-MESD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MESD versus SRPK2 in HNSC, with a Pearson correlation of -0.21.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MESD→partner) and Y-score (partner→MESD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSRPK2 →-0.466-0.204.002<.00134
GBMMAL2 →-0.907-0.281<.001<.00134
LUADSMURF1 →-0.530-0.276<.001<.00134
LSCCGAN →-0.588-0.184<.001<.00134
UCECADAM28 →+1.122+0.249<.001<.00134
GBMCRYM →-1.513-0.292<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,242 associations by consensus.

MESD vs SRPK2 — HNSC

Per-sample scatter of MESD vs SRPK2 in HNSC (Pearson r = -0.21).

Explore this scatter interactively →

Exploration