MED20

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MED20 protein abundance is significantly associated with the RNA expression of many other genes, with 11,349 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MED20-associated genes across cancer lineages are RFC5, CENPH, and EME1. Each is linked with MED20 in more than 5 cancer types. Because this analysis shows association rather than direction, both MED20-to-partner and partner-to-MED20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MED20 versus RFC5 in LSCC, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MED20→partner) and Y-score (partner→MED20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRFC5 →+0.560+0.238<.001<.00136
LUADCENPH →+0.720+0.208<.001<.00135
LSCCEME1 →+0.692+0.316<.001<.00135
LSCCFAM72B →+0.964+0.334<.001<.00135
LSCCKIF22 →+0.619+0.291<.001<.00135
GBMKIF18B →+0.908+0.281<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,349 associations by consensus.

MED20 vs RFC5 — LSCC

Per-sample scatter of MED20 vs RFC5 in LSCC (Pearson r = 0.55).

Explore this scatter interactively →

Exploration