MED1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MED1 mutation is significantly associated with the RNA expression of many other genes, with 790 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MED1-associated genes across cancer lineages are SLC7A14, PRKAA2, and BTC. Each is linked with MED1 in more than 1 cancer types. Because this analysis shows association rather than direction, both MED1-to-partner and partner-to-MED1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLC7A14 grouped by MED1-low versus MED1-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MED1→partner) and Y-score (partner→MED1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaSLC7A14 →+0.517+2.874<.001.00932
BLOOD_LymphomaPRKAA2 →+0.622+3.392.001.00232
BLOOD_LymphomaBTC →+0.057+2.956<.001.00832
LARGE_INTESTINEFAXC →+1.294+3.628<.001<.00132
LARGE_INTESTINEGMCL1 →+0.440+2.588.007.00432
LARGE_INTESTINEF11 →+0.030+2.204.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 790 associations by consensus.

SLC7A14 by MED1 expression — BLOOD_Lymphoma

Box plot of SLC7A14 in MED1-low vs MED1-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration