MDM1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MDM1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,187 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MDM1-associated genes across cancer lineages are CBX7, SPEF1, and CENPA. Each is linked with MDM1 in more than 3 cancer types. Because this analysis shows association rather than direction, both MDM1-to-partner and partner-to-MDM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MDM1 versus CBX7 in BRCA, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MDM1→partner) and Y-score (partner→MDM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACBX7 →+0.620+0.344.005.00134
UCECSPEF1 →+1.560+0.439<.001<.00134
BRCACENPA →-0.958-0.417.005.00434
UCECCCDC170 →+1.110+0.593<.001<.00134
GBMATP8A1 →+0.818+0.264<.001.00134
LUADBPIFB1 →+2.128+0.310<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,187 associations by consensus.

MDM1 vs CBX7 — BRCA

Per-sample scatter of MDM1 vs CBX7 in BRCA (Pearson r = 0.30).

Explore this scatter interactively →

Exploration