MCM6

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MCM6 mutation is significantly associated with the mutation status of many other genes, with 2,950 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MCM6-associated genes across cancer lineages are DES, ADCK1, and CNKSR2. Each is linked with MCM6 in more than 3 cancer types. Because this analysis shows association rather than direction, both MCM6-to-partner and partner-to-MCM6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DES grouped by MCM6-low versus MCM6-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MCM6→partner) and Y-score (partner→MCM6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINDES →+5.053+4.239.007.00714
BLOOD_LeukemiaADCK1 →+3.548+3.845.003.00314
BLOOD_LeukemiaCNKSR2 →+3.870+4.050.002.00213
SKINRIN1 →+5.053+4.239.007.00713
SKINSLC4A5 →+3.638+4.117.002.00213
SKINARHGEF1 →+5.638+4.977<.001<.00113
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,950 associations by consensus.

DES by MCM6 expression — SKIN

Box plot of DES in MCM6-low vs MCM6-high samples in SKIN.

Explore this box plot interactively →

Exploration