MCM5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MCM5 mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MCM5-associated genes across cancer lineages are JNK_pT183_Y185, MEK1, and PCNA. Each is linked with MCM5 in more than 1 cancer types. Because this analysis shows association rather than direction, both MCM5-to-partner and partner-to-MCM5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, JNK_pT183_Y185 grouped by MCM5-low versus MCM5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MCM5→partner) and Y-score (partner→MCM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJNK_pT183_Y185 →-0.160-2.321.011.03332
UCECMEK1 →+0.466+2.584<.001.01032
UCECPCNA →+0.270+2.584<.001.01032
UCECRad50 →-0.250-1.415.005.04632
UCECSTAT3_pY705 →-0.410-2.115<.001.01632
UCECCaspase-7-cleavedD198 →+0.478+2.019.031.01732
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

JNK_pT183_Y185 by MCM5 expression — UCEC

Box plot of JNK_pT183_Y185 in MCM5-low vs MCM5-high samples in UCEC.

Explore this box plot interactively →

Exploration