MC2R

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MC2R mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible MC2R-associated genes across cancer lineages are MYL10, SERPINA7, and LCE3D. Each is linked with MC2R in more than 1 cancer types. Because this analysis shows association rather than direction, both MC2R-to-partner and partner-to-MC2R results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MC2R→partner) and Y-score (partner→MC2R) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCMYL10 →+0.055+3.523.007.00831
LUNG_SCLCSERPINA7 →+0.045+3.817<.001.00431
LUNG_SCLCLCE3D →+0.050+3.817.001.00431
LUNG_SCLCTSBP1 →+0.042+3.898.003.00531
LUNG_SCLCBHLHA9 →+0.046+3.817<.001.00431
LUNG_SCLCLEUTX →+0.060+3.817<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Exploration