MATK

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MATK mutation is significantly associated with the RNA expression of many other genes, with 2,897 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MATK-associated genes across cancer lineages are WDR5, HNRNPCP1, and RFC5. Each is linked with MATK in more than 2 cancer types. Because this analysis shows association rather than direction, both MATK-to-partner and partner-to-MATK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, WDR5 grouped by MATK-low versus MATK-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MATK→partner) and Y-score (partner→MATK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECWDR5 →+0.465+2.447.003.00133
UCECHNRNPCP1 →+0.666+2.947<.001<.00133
UCECRFC5 →+0.574+2.593.001.00633
UCECNCAPH2 →+0.477+3.716.002<.00133
SKCMDCTN3 →+0.367+2.006.002.00533
SKCMUBXN11 →+0.438+2.710.005.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,897 associations by consensus.

WDR5 by MATK expression — UCEC

Box plot of WDR5 in MATK-low vs MATK-high samples in UCEC.

Explore this box plot interactively →

Exploration