MAP1LC3B2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAP1LC3B2 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,902 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MAP1LC3B2-associated proteins across cancer lineages are ASCC3, HNRNPR, and HNRNPU. Each is linked with MAP1LC3B2 in more than 3 cancer types. Because this analysis shows association rather than direction, both MAP1LC3B2-to-partner and partner-to-MAP1LC3B2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MAP1LC3B2 versus ASCC3 in HNSC, with a Pearson correlation of -0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MAP1LC3B2→partner) and Y-score (partner→MAP1LC3B2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCASCC3 →-0.233-0.867<.001.00434
LSCCHNRNPR →+0.189+0.925.004.00134
LSCCHNRNPU →+0.243+1.000<.001<.00134
GBMTHRA_S12 →+0.599+0.702<.001<.00134
HNSCTUB →+0.817+1.007.007.00233
OVSSR1 →-0.368-0.706<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,902 associations by consensus.

MAP1LC3B2 vs ASCC3 — HNSC

Per-sample scatter of MAP1LC3B2 vs ASCC3 in HNSC (Pearson r = -0.30).

Explore this scatter interactively →

Exploration