MAN2C1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MAN2C1 mutation is significantly associated with the RNA expression of many other genes, with 192 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MAN2C1-associated genes across cancer lineages are UROC1, SLC6A19, and OPRPN. Each is linked with MAN2C1 in more than 1 cancer types. Because this analysis shows association rather than direction, both MAN2C1-to-partner and partner-to-MAN2C1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UROC1 grouped by MAN2C1-low versus MAN2C1-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAN2C1→partner) and Y-score (partner→MAN2C1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaUROC1 →+0.116+3.954<.001.00532
LARGE_INTESTINESLC6A19 →+1.191+2.607<.001.00832
URINARY_TRACTOPRPN →+0.060+5.087<.001.00431
BLOOD_LymphomaCPN1 →+0.152+3.736<.001.00931
BLOOD_LymphomaKRT71 →+0.007+4.058<.001.00931
BLOOD_LymphomaSLC7A13 →+0.004+4.662<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 192 associations by consensus.

UROC1 by MAN2C1 expression — BLOOD_Lymphoma

Box plot of UROC1 in MAN2C1-low vs MAN2C1-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration