MAGEE1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAGEE1 mutation is significantly associated with the RNA expression of many other genes, with 4,730 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MAGEE1-associated genes across cancer lineages are PTMAP4, SH3BGRL3, and ANTXR2. Each is linked with MAGEE1 in more than 3 cancer types. Because this analysis shows association rather than direction, both MAGEE1-to-partner and partner-to-MAGEE1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAGEE1→partner) and Y-score (partner→MAGEE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPTMAP4 →+1.079+2.341.001.00334
UCECSH3BGRL3 →+0.299+2.169<.001.00234
LUSCANTXR2 →+0.610+2.011.003.00534
UCECBRI3BP →+0.671+1.970<.001<.00133
COADSYCE3 →+0.564+2.817<.001.00133
COADCCNG1P1 →+0.110+2.543.004<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,730 associations by consensus.

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