MAGEB2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAGEB2 mutation is significantly associated with the RNA expression of many other genes, with 3,185 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MAGEB2-associated genes across cancer lineages are SAC3D1, SF3B5, and ATPAF2. Each is linked with MAGEB2 in more than 2 cancer types. Because this analysis shows association rather than direction, both MAGEB2-to-partner and partner-to-MAGEB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SAC3D1 grouped by MAGEB2-low versus MAGEB2-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAGEB2→partner) and Y-score (partner→MAGEB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCSAC3D1 →+0.465+2.906.003.00133
LUSCSF3B5 →+0.432+2.628<.001.00533
UCECATPAF2 →+0.366+1.847<.001<.00133
LUSCHPF1 →+0.417+2.918.002.00133
LUSCHSD17B10 →+0.402+3.459.002.00533
UCECCDC34 →+0.447+4.108<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,185 associations by consensus.

SAC3D1 by MAGEB2 expression — LUSC

Box plot of SAC3D1 in MAGEB2-low vs MAGEB2-high samples in LUSC.

Explore this box plot interactively →

Exploration