MAFA

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MAFA RNA expression is significantly associated with the go_rna of many other GO terms, with 3,304 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible MAFA-associated GO terms across cancer lineages are Positive regulation of stem cell population maintenance, Regulation of stem cell population maintenance, and RNA splicing, via transesterification reactions. Each is linked with MAFA in more than 10 cancer types. Because this analysis shows association rather than direction, both MAFA-to-partner and partner-to-MAFA results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MAFA→partner) and Y-score (partner→MAFA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERPositive regulation of stem cell population maintenance →+0.073+0.326<.001.001311
LARGE_INTESTINERegulation of stem cell population maintenance →+0.065+0.358<.001.004311
OESOPHAGUSRNA splicing, via transesterification reactions →+0.061+0.931.001.002311
OESOPHAGUSRNA splicing, via transesterification reactions with bulged adenosine as nucleophile →+0.060+0.931.001.002311
OESOPHAGUSmRNA splicing, via spliceosome →+0.060+0.931.001.002311
SOFT_TISSUENegative regulation of adaptive immune response →-0.094-0.785<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,304 associations by consensus.

Exploration