LYSMD4

Across TCGA patient cohorts, LYSMD4 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,360 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LYSMD4-associated proteins across cancer lineages are P4HB, FNDC3B_S208, and HDLBP. Each is linked with LYSMD4 in more than 4 cancer types. Because this analysis shows association rather than direction, both LYSMD4-to-partner and partner-to-LYSMD4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LYSMD4 versus P4HB in GBM, with a Pearson correlation of -0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LYSMD4→partner) and Y-score (partner→LYSMD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	P4HB →	-0.542	-0.381	<.001	<.001	3	5
LUAD	FNDC3B_S208 →	-0.467	-0.424	<.001	.001	3	5
LSCC	HDLBP →	-0.267	-0.444	<.001	<.001	3	5
LSCC	PPP1R18_S145 →	-0.502	-0.520	.001	.001	3	4
GBM	NNMT →	-0.794	-0.359	.003	<.001	3	4
GBM	RCN1 →	-0.431	-0.354	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,360 associations by consensus.

LYSMD4 vs P4HB — GBM

Explore this scatter interactively →