LYSMD3

Across TCGA patient cohorts, LYSMD3 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,149 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LYSMD3-associated proteins across cancer lineages are FAM114A1, AKAP13_S2699, and KIF2A. Each is linked with LYSMD3 in more than 2 cancer types. Because this analysis shows association rather than direction, both LYSMD3-to-partner and partner-to-LYSMD3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LYSMD3 versus FAM114A1 in BRCA, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LYSMD3→partner) and Y-score (partner→LYSMD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	FAM114A1 →	+0.266	+0.532	.003	.004	3	3
BRCA	AKAP13_S2699 →	+1.049	+0.924	.002	.004	3	3
OV	KIF2A →	+0.201	+0.402	.003	.005	3	3
PDAC	MARS2 →	-0.394	-0.319	<.001	<.001	3	3
COAD	MRPS10 →	-0.360	-0.585	<.001	<.001	3	3
BRCA	FAM172A →	+0.388	+0.594	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,149 associations by consensus.

LYSMD3 vs FAM114A1 — BRCA

Explore this scatter interactively →