Across TCGA patient cohorts, LYPD6 RNA expression is significantly associated with the RNA expression of many other genes, with 16,911 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LYPD6-associated genes across cancer lineages are LYPD6B, PRKCI, and ZMYM4. Each is linked with LYPD6 in more than 30 cancer types. Because this analysis shows association rather than direction, both LYPD6-to-partner and partner-to-LYPD6 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LYPD6→partner) and Y-score (partner→LYPD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CHOL	LYPD6B →	+3.545	+2.922	<.001	<.001	3	31
UCEC	PRKCI →	+0.847	+0.825	<.001	<.001	3	27
UVM	ZMYM4 →	+0.935	+0.533	<.001	.002	3	27
UVM	PRPF40A →	+1.284	+0.590	<.001	.005	3	26
UVM	TTC30B →	+1.034	+0.691	<.001	<.001	3	26
UVM	OPA1 →	+0.904	+0.536	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,911 associations by consensus.

Exploration

LYPD6 survival (RNA) · tumor vs normal (RNA) · all LYPD6 data types