LY96

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LY96 protein abundance is significantly associated with the RNA expression of many other genes, with 10,202 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LY96-associated genes across cancer lineages are ARHGAP15, PCCB, and IL2RA. Each is linked with LY96 in more than 3 cancer types. Because this analysis shows association rather than direction, both LY96-to-partner and partner-to-LY96 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LY96 versus ARHGAP15 in OV, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LY96→partner) and Y-score (partner→LY96) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARHGAP15 →+1.455+0.371.004.00434
LSCCPCCB →-0.541-0.386<.001<.00134
GBMIL2RA →+1.369+0.709<.001<.00134
BRCATARS2 →-0.503-0.378.001.00234
OVIGHV1-2 →+3.584+0.418.003<.00134
GBMLINC02611 →+0.763+0.695<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,202 associations by consensus.

LY96 vs ARHGAP15 — OV

Per-sample scatter of LY96 vs ARHGAP15 in OV (Pearson r = 0.44).

Explore this scatter interactively →

Exploration