LTBP3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LTBP3 protein abundance is significantly associated with the RNA expression of many other genes, with 11,678 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LTBP3-associated genes across cancer lineages are MYL9, ANTXR1, and EFEMP2. Each is linked with LTBP3 in more than 8 cancer types. Because this analysis shows association rather than direction, both LTBP3-to-partner and partner-to-LTBP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LTBP3 versus MYL9 in COAD, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LTBP3→partner) and Y-score (partner→LTBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMYL9 →+1.309+0.746<.001<.00139
OVANTXR1 →+1.069+0.454<.001<.00139
OVEFEMP2 →+1.587+0.745<.001<.00139
BRCAMSRB3 →+1.194+0.479<.001<.00139
OVNTM →+1.519+0.610<.001<.00139
OVDACT3 →+1.042+0.774<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,678 associations by consensus.

LTBP3 vs MYL9 — COAD

Per-sample scatter of LTBP3 vs MYL9 in COAD (Pearson r = 0.43).

Explore this scatter interactively →

Exploration