LSM3P2

Across TCGA patient cohorts, LSM3P2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,613 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LSM3P2-associated GO terms across cancer lineages are Vacuole organization, Regulation of intrinsic apoptotic signaling pathway, and Positive regulation of peptidase activity. Each is linked with LSM3P2 in more than 14 cancer types. Because this analysis shows association rather than direction, both LSM3P2-to-partner and partner-to-LSM3P2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vacuole organization grouped by LSM3P2-low versus LSM3P2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LSM3P2→partner) and Y-score (partner→LSM3P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vacuole organization →	+0.060	+0.483	<.001	<.001	3	15
STAD	Regulation of intrinsic apoptotic signaling pathway →	+0.058	+0.549	<.001	<.001	3	13
STAD	Positive regulation of peptidase activity →	+0.054	+0.512	<.001	<.001	3	13
STAD	Response to reactive oxygen species →	+0.052	+0.497	<.001	<.001	3	13
STAD	Modulation by host of viral process →	+0.059	+0.514	<.001	<.001	3	13
STAD	Negative regulation of proteolysis →	+0.051	+0.499	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,613 associations by consensus.

Vacuole organization by LSM3P2 expression — STAD

Explore this box plot interactively →