LSM3

Across TCGA cell cohorts, LSM3 RNA expression is significantly associated with the RNA expression of many other genes, with 7,580 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible LSM3-associated genes across cancer lineages are RAD18, SGO1, and METTL6. Each is linked with LSM3 in more than 18 cancer types. Because this analysis shows association rather than direction, both LSM3-to-partner and partner-to-LSM3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LSM3 versus RAD18 in OESOPHAGUS, with a Pearson correlation of 0.72.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LSM3→partner) and Y-score (partner→LSM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	RAD18 →	+1.781	+0.989	<.001	<.001	3	19
OESOPHAGUS	SGO1 →	+1.645	+1.033	<.001	<.001	3	18
BLOOD_Myeloma	METTL6 →	+0.965	+0.995	<.001	.002	3	17
UPPER_AERODIGESTIVE_TRACT	CHCHD4 →	+1.036	+0.996	<.001	<.001	3	16
LUNG_NSCLC_LUSC	PSMD6 →	+1.064	+1.197	<.001	<.001	2	17
LIVER	CNOT10 →	+0.995	+1.394	.002	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,580 associations by consensus.

LSM3 vs RAD18 — OESOPHAGUS

Explore this scatter interactively →