LSM1P2

Across TCGA patient cohorts, LSM1P2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,489 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LSM1P2-associated GO terms across cancer lineages are Regulation of calcium ion transmembrane transport, Glycerophospholipid metabolic process, and Hormone metabolic process. Each is linked with LSM1P2 in more than 2 cancer types. Because this analysis shows association rather than direction, both LSM1P2-to-partner and partner-to-LSM1P2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of calcium ion transmembrane transport grouped by LSM1P2-low versus LSM1P2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LSM1P2→partner) and Y-score (partner→LSM1P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of calcium ion transmembrane transport →	+0.070	+0.041	<.001	.002	3	3
STAD	Glycerophospholipid metabolic process →	+0.159	+0.036	<.001	<.001	3	3
STAD	Hormone metabolic process →	+0.091	+0.033	<.001	<.001	3	3
STAD	Negative regulation of endoplasmic reticulum calcium ion concentration →	+0.139	+0.066	<.001	<.001	3	3
STAD	Reactive oxygen species metabolic process →	+0.161	+0.040	<.001	<.001	3	2
STAD	Peptide transport →	+0.113	+0.036	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,489 associations by consensus.

Regulation of calcium ion transmembrane transport by LSM1P2 expression — STAD

Explore this box plot interactively →