LSINCT5

Across TCGA patient cohorts, LSINCT5 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,896 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LSINCT5-associated GO terms across cancer lineages are Protein methylation, Rac protein signal transduction, and Peptidyl-lysine methylation. Each is linked with LSINCT5 in more than 16 cancer types. Because this analysis shows association rather than direction, both LSINCT5-to-partner and partner-to-LSINCT5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein methylation grouped by LSINCT5-low versus LSINCT5-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LSINCT5→partner) and Y-score (partner→LSINCT5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Protein methylation →	+0.061	+0.139	<.001	<.001	3	17
ESCA	Rac protein signal transduction →	+0.052	+0.104	.003	.003	2	16
STAD	Peptidyl-lysine methylation →	+0.054	+0.074	<.001	<.001	3	15
STAD	Peptidyl-lysine modification →	+0.057	+0.073	<.001	<.001	3	15
STAD	Positive regulation of amide metabolic process →	+0.059	+0.068	<.001	<.001	3	15
STAD	Entrainment of circadian clock →	+0.051	+0.057	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,896 associations by consensus.

Protein methylation by LSINCT5 expression — ESCA

Explore this box plot interactively →