LSG1

Across TCGA cell cohorts, LSG1 RNA expression is significantly associated with the RNA expression of many other genes, with 10,694 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible LSG1-associated genes across cancer lineages are ABCF3, WDR53, and TBCCD1. Each is linked with LSG1 in more than 18 cancer types. Because this analysis shows association rather than direction, both LSG1-to-partner and partner-to-LSG1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LSG1 versus ABCF3 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.81.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LSG1→partner) and Y-score (partner→LSG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	ABCF3 →	+1.045	+1.282	<.001	<.001	3	19
LUNG_NSCLC_LUSC	WDR53 →	+1.544	+1.978	<.001	<.001	3	19
LUNG_NSCLC_LUSC	TBCCD1 →	+1.261	+1.429	<.001	<.001	3	18
LUNG_NSCLC_LUSC	SENP5 →	+1.113	+1.267	<.001	<.001	3	18
LUNG_NSCLC_LUSC	EIF2B5 →	+1.228	+1.418	<.001	<.001	3	18
LUNG_NSCLC_LUSC	DVL3 →	+1.374	+1.319	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,694 associations by consensus.

LSG1 vs ABCF3 — LUNG_NSCLC_LUSC

Explore this scatter interactively →