Across TCGA cell cohorts, LRRTM3 RNA expression is significantly associated with the mutation status of many other genes, with 133 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible LRRTM3-associated genes across cancer lineages are ANKRD11, RANBP6, and SERPINA9. Each is linked with LRRTM3 in more than 2 cancer types. Because this analysis shows association rather than direction, both LRRTM3-to-partner and partner-to-LRRTM3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRTM3→partner) and Y-score (partner→LRRTM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	ANKRD11 →	+2.750	+0.086	.002	<.001	3	3
BLOOD_Lymphoma	RANBP6 →	+2.989	+0.863	.007	<.001	3	2
SKIN	SERPINA9 →	+3.921	+0.075	.001	.002	3	2
BLOOD_Leukemia	ARFGAP1 →	+5.539	+0.006	.003	<.001	3	2
BLOOD_Leukemia	PRDM16 →	+2.664	+0.002	.009	<.001	3	2
BONE	SDK1 →	+3.643	+0.112	.007	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 133 associations by consensus.

Exploration

LRRTM3 survival (RNA) · tumor vs normal (RNA) · all LRRTM3 data types