LRRIQ4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRRIQ4 protein abundance is significantly associated with the RNA expression of many other genes, with 91 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LRRIQ4-associated genes across cancer lineages are ANKRD54, COG4, and AXIN1. Each is linked with LRRIQ4 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRRIQ4-to-partner and partner-to-LRRIQ4 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRIQ4→partner) and Y-score (partner→LRRIQ4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADANKRD54 →+0.510+1.076.004<.00131
COADCOG4 →+0.707+1.479.003.00131
COADAXIN1 →+0.636+0.901.002.00831
COADPOMT1 →+0.454+1.047.005.00131
COADCHMP1A →+0.529+1.280<.001<.00131
COADCNMD →+0.078+1.145.004.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 91 associations by consensus.

Exploration