LRRIQ4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRRIQ4 mutation is significantly associated with the total protein of many other genes, with 30 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LRRIQ4-associated genes across cancer lineages are eEF2, 4E-BP1, and ERK2. Each is linked with LRRIQ4 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRRIQ4-to-partner and partner-to-LRRIQ4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRIQ4→partner) and Y-score (partner→LRRIQ4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADeEF2 →+0.523+2.815.001.03632
COAD4E-BP1 →+0.274+2.815.022.03632
UCECERK2 →+0.169+1.700.038.04432
UCECSTAT3_pY705 →-0.414-1.690<.001.04232
UCECAR →-0.410-3.169.009.01832
UCECATM →-0.651-2.906<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

Exploration